Resources
Challenge Credentialed Access
BioNLP Workshop 2023 Shared Task 1A: Problem List Summarization
Yanjun Gao, Dmitriy Dligach, Timothy Miller, Majid Afshar
bionlp clinical natural language processing electronic health record summarization
Published: Nov. 12, 2023. Version: 2.0.0
Database Credentialed Access
Tasks 1 and 3 from Progress Note Understanding Suite of Tasks: SOAP Note Tagging and Problem List Summarization
Yanjun Gao, John Caskey, Timothy Miller, Brihat Sharma, Matthew Churpek, Dmitriy Dligach, Majid Afshar
Published: Sept. 30, 2022. Version: 1.0.0
Database Credentialed Access
Critical care database comprising patients with infection at Zigong Fourth People's Hospital
Ping Xu, Lin Chen, Zhongheng Zhang
Published: June 30, 2022. Version: 1.1
Database Credentialed Access
DrugEHRQA: A Question Answering Dataset on Structured and Unstructured Electronic Health Records For Medicine Related Queries
Jayetri Bardhan, Anthony Colas, Kirk Roberts, Daisy Zhe Wang
Published: April 12, 2022. Version: 1.0.0
Database Credentialed Access
Synthetic Acute Hypotension and Sepsis Datasets Based on MIMIC-III and Published as Part of the Health Gym Project
Nicholas Kuo, Simon Finfer, Louisa Jorm, Sebastiano Barbieri
sepsis machine learning acute hypotension reinforcement learning synthetic dataset generative modelling wasserstein generative adversarial network
Published: Feb. 23, 2022. Version: 1.0.0
Database Credentialed Access
CLIP: A Dataset for Extracting Action Items for Physicians from Hospital Discharge Notes
James Mullenbach, Yada Pruksachatkun, Sean Adler, Jennifer Seale, Jordan Swartz, T Greg McKelvey, Yi Yang, David Sontag
Published: June 21, 2021. Version: 1.0.0
Database Credentialed Access
RadGraph: Extracting Clinical Entities and Relations from Radiology Reports
Saahil Jain, Ashwin Agrawal, Adriel Saporta, Steven QH Truong, Du Nguyen Duong, Tan Bui, Pierre Chambon, Matthew Lungren, Andrew Ng, Curtis Langlotz, Pranav Rajpurkar
entity and relation extraction graph multi-modal radiology natural language processing
Published: June 3, 2021. Version: 1.0.0
Challenge Credentialed Access
Discharge Me: BioNLP ACL'24 Shared Task on Streamlining Discharge Documentation
Justin Xu
generation bionlp acl discharge summary
Published: April 12, 2024. Version: 1.3
Challenge Credentialed Access
Discharge Me: BioNLP ACL'24 Shared Task on Streamlining Discharge Documentation
Justin Xu
generation bionlp acl discharge summary
Published: April 12, 2024. Version: 1.3
Database Open Access
Respiratory and heart rate monitoring dataset from aeration study
Ella Frances Sophia Guy, Isaac Flett, Jaimey Anne Clifton, Trudy Caljé-van der Klei, Rongqing Chen, Jennifer Knopp, Knut Moeller, James Geoffrey Chase
Published: March 20, 2024. Version: 1.0.0