function genHRVann(record, HRVparams, annName, samples, metrictype, metric) % % genHRVann(record, HRVparams, annName, samples, metrictype, metric) % % OVERVIEW: % This function generates annotation files to be used with mxm.c % using the function write_ann.m % INPUT: % record : a string with the name of the subject/record % HRVparams : struct with settings % annName : a string with the desired file extension % samples : the time data of the annotations to be written (in % samples) % metrictype : this details the type of measurement to be written to % an annotion file according to the following standard % 0 = SDNN 5 = TTLPWR % 1 = LF/HF 6 = RMSSD % 2 = LF 7 = PNN50 % 3 = HF 8 = Mean % 4 = VLF % metric : the annotation to be saved. % % OUTPUT: % A .annName file with annotation timing and metrics. % REPO: % https://github.com/cliffordlab/PhysioNet-Cardiovascular-Signal-Toolbox % ORIGINAL SOURCE AND AUTHORS: % This script written by Adriana N. Vest % Dependent scripts written by various authors % (see functions for details) % COPYRIGHT (C) 2016 % LICENSE: % This software is offered freely and without warranty under % the GNU (v3 or later) public license. See license file for % more information type = repmat('=',length(metric),1); % this type needs to be on every annotation subtype = repmat(metrictype,length(metric),1); % this details the type of measurement % 0 = SDNN 5 = % 1 = LF/HF 6 = % 2 = RMSSD 7 = % 3 = 8 = % 4 = 9 = chan = zeros(length(metric),1); % Default Value num = zeros(length(metric),1); % Default Value comments = cell(length(metric)); for k = 1:length(metric) try comments{k} = char(string(metric(k))); % Actual HRV Metric to be compared in string format catch comments{k} = []; end end write_ann(record,HRVparams,annName,samples,type,subtype,chan,num,comments); % Convert annotation locations from sample number to WFDB compatible time %[timeStamp,~] = wfdbtime(record,samples); % % Write annotations to .txt file in WFDB compatible format % filename = [record '_temp.txt']; % for i = 1:length(samples) % fileID = fopen(filename,'a'); % %fprintf(fileID, '\t%s %7d\t%c\t%5d%5d%5d\r\n',time_formatted,samples(i),ann(i),subType(i),chan(i),num(i)); % fprintf(fileID,'%12s%9d%6s%5d%5d%5d%12s\0\n', timeStamp{i},samples(i),type(i),subtype(i),chan(i),num(i),comments{i}); % fclose(fileID); % end % clear i % % %% 3. Convert .txt file to a WFDB formatted binary .ann file % statement = ['!wrann -r ' record ' -a ann < ' record '_temp.txt']; % eval(statement); % % statement = ['!rdann -r ' record ' -a ann > 1test.txt']; % eval(statement); end