Resources


Database Open Access

MIMIC-III Clinical Database Demo

Alistair Johnson, Tom Pollard, Roger Mark

An open source demo of the MIMIC-III Clinical Database

mimic critical care electronic health records

Published: April 24, 2019. Version: 1.4


Database Credentialed Access

MedNLI for Shared Task at ACL BioNLP 2019

Chaitanya Shivade

MedNLI test set for Shared Task at BioNLP 2019

mimic natural language inference recognizing textual entailment

Published: April 17, 2019. Version: 1.0.0


Database Open Access

BIDMC PPG and Respiration Dataset

This dataset contains signals and numerics extracted from the much larger MIMIC II matched waveform Database, along with manual breath annotations made from two annotators, using the impedance respiratory signal.

ecg multiparameter photoplethysmogram

Published: June 20, 2018. Version: 1.0.0

Visualize waveforms

Challenge Open Access

2018 IEEE BHI and BSN Data Challenge

Tom Pollard, Alistair Johnson, Jesse Raffa

A challenge to explore real clinical questions in critically ill patients using the MIMIC. A collaboration with the IEEE Conference on Biomedical and Health Informatics 2018 and the IEEE Conference on Body Sensor Networks.

challenge mimic weekend effect ieee

Published: Feb. 5, 2018. Version: 1.0


Database Credentialed Access

MIMIC-III Clinical Database

Alistair Johnson, Tom Pollard, Roger Mark

MIMIC-III is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012.

The databa…

machine learning natural language processing critical care intensive care clinical

Published: Sept. 4, 2016. Version: 1.4


Challenge Open Access

Robust Detection of Heart Beats in Multimodal Data - The PhysioNet Computing in Cardiology Challenge 2014

This challenge aims to encourage the exploration of robust methods for locating heart beats in continuous long-term data from bedside monitors and similar devices that record not only ECG but usually other physiologic signals as well, including puls…

challenge ecg multiparameter

Published: Jan. 7, 2014. Version: 1.0.0


Challenge Open Access

Predicting Mortality of ICU Patients - The PhysioNet Computing in Cardiology Challenge 2012

The focus of the PhysioNet/CinC Challenge 2012 is to develop methods for patient-specific prediction of in-hospital mortality. Participants will use information collected during the first two days of an ICU stay to predict which patients survive the…

challenge mimic mortality prediction ehr

Published: Jan. 20, 2012. Version: 1.0.0


Challenge Open Access

Predicting Acute Hypotensive Episodes - The PhysioNet Computing in Cardiology Challenge 2009

This year's challenge is the tenth in the annual series of open challenges hosted by PhysioNet in cooperation with Computers in Cardiology. The goal of the challenge is to predict which patients in the challenge dataset will experience an acute …

challenge mimic ehr hypertension multiparameter

Published: Jan. 27, 2009. Version: 1.0.0


Software Open Access

Cardiac Output Estimation from Arterial Blood Pressure Waveforms

This project contains the code used for a study that rigorously compares 11 estimates against thermodilution cardiac output (TCO) using 120 subjects from the MIMIC II database (all subjects for whom multiple TCO measurements were recorded at the tim…

cardiac output estimation

Published: Aug. 2, 2007. Version: 1.0.0


Software Open Access

record - An application for capturing data from an HP CMS (Merlin) monitor

record is an MS-DOS application that determines what signals and measurements are available from a Hewlett-Packard (Agilent/Philips) Merlin (a.k.a. CMS or Component Monitoring System) patient monitor, and then logs all of the available data to disk …

mimic monitor

Published: June 9, 2003. Version: 1.0.0