Resources


Database Credentialed Access

MIMIC-CXR Database

Alistair Johnson, Tom Pollard, Roger Mark, Seth Berkowitz, Steven Horng

Chest radiographs in DICOM format with associated free-text reports.

mimic machine learning natural language processing chest x-rays computer vision radiology

Published: Sept. 19, 2019. Version: 2.0.0


Database Credentialed Access

MIMIC-CXR-JPG - chest radiographs with structured labels

Alistair Johnson, matt lungren, Yifan Peng, Zhiyong Lu, Roger Mark, Seth Berkowitz, Steven Horng

Chest x-rays in JPG format with structured labels derived from the associated radiology report.

mimic computer vision radiology deep learning chest x-ray

Published: Nov. 14, 2019. Version: 2.0.0


Database Open Access

MIMIC Database

The MIMIC Database includes data recorded from over 90 ICU patients. The data in each case include signals and periodic measurements obtained from a bedside monitor as well as clinical data obtained from the patient's medical record. The recordi…

critical care mimic icu health record ehr

Published: March 15, 2000. Version: 1.0.0

Visualize waveforms

Database Credentialed Access

MIMIC-III Clinical Database

Alistair Johnson, Tom Pollard, Roger Mark

MIMIC-III is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012.

The databa…

critical care intensive care machine learning natural language processing clinical

Published: Sept. 4, 2016. Version: 1.4


Database Open Access

MIMIC-III Clinical Database Demo

Alistair Johnson, Tom Pollard, Roger Mark

An open source demo of the MIMIC-III Clinical Database

critical care mimic electronic health records

Published: April 24, 2019. Version: 1.4


Challenge Open Access

2018 IEEE BHI and BSN Data Challenge

Tom Pollard, Alistair Johnson, Jesse Raffa

A challenge to explore real clinical questions in critically ill patients using the MIMIC. A collaboration with the IEEE Conference on Biomedical and Health Informatics 2018 and the IEEE Conference on Body Sensor Networks.

mimic challenge weekend effect ieee

Published: Feb. 5, 2018. Version: 1.0


Database Credentialed Access

MedNLI for Shared Task at ACL BioNLP 2019

Chaitanya Shivade

Data for the MedNLI Shared Task at the 2019 ACL BioNLP 2019 Workshop on Biomedical Language Processing

recognizing textual entailment mimic natural language inference

Published: Nov. 28, 2019. Version: 1.0.1


Database Credentialed Access

Paediatric Intensive Care database

Haomin Li, Xian Zeng, Gang Yu

PIC (Paediatric Intensive Care) is a large paediatric-specific, single-centre, bilingual database comprising information relating to children admitted to critical care units at a large children’s hospital in China.

critical care intensive care natural language processing pediatrics

Published: Dec. 1, 2019. Version: 1.0.0


Database Credentialed Access

Phenotype Annotations for Patient Notes in the MIMIC-III Database

Edward Moseley, Leo Anthony Celi, Joy Wu, Franck Dernoncourt

This dataset contains clinical notes which have been annotated by at least two expert human annotators for over ten high-context patient phenotypes, including advanced/metastatic cancer, substance abuse, and treatment non-adherence.

natural language processing patient classification

Published: March 5, 2020. Version: 1.20.03


Database Open Access

BIDMC PPG and Respiration Dataset

This dataset contains signals and numerics extracted from the much larger MIMIC II matched waveform Database, along with manual breath annotations made from two annotators, using the impedance respiratory signal.

ecg multiparameter photoplethysmogram

Published: June 20, 2018. Version: 1.0.0

Visualize waveforms