Resources
Database Credentialed Access
MIMIC-III and eICU-CRD: Feature Representation by FIDDLE Preprocessing
Shengpu Tang, Parmida Davarmanesh, Yanmeng Song, Danai Koutra, Michael Sjoding, Jenna Wiens
preprocessing machine learning electronic health record
Published: April 28, 2021. Version: 1.0.0
Database Credentialed Access
Annotation dataset of social determinants of health from MIMIC-III Clinical Care Database
Marco Guevara, Shan Chen, Spencer Thomas, Danielle Bitterman
natural language processing social determinants of health
Published: Jan. 24, 2024. Version: 1.0.1
Database Credentialed Access
National Institutes of Health Stroke Scale (NIHSS) Annotations for the MIMIC-III Database
Jiayang Wang, Xiaoshuo Huang, Lin Yang, Jiao Li
Published: Jan. 25, 2021. Version: 1.0.0
Database Credentialed Access
ODD: A Benchmark Dataset for the NLP-based Opioid Related Aberrant Behavior Detection
Sunjae Kwon, Xun Wang, Weisong Liu, Emily Druhl, Minhee Sung, Joel Reisman, Wenjun Li, Robert Kerns, William Becker, Hong Yu
natural language processing substance use opioid related aberrant behavior
Published: Jan. 11, 2024. Version: 1.0.0
Challenge Credentialed Access
BioNLP Workshop 2023 Shared Task 1A: Problem List Summarization
Yanjun Gao, Dmitriy Dligach, Timothy Miller, Majid Afshar
clinical natural language processing bionlp electronic health record summarization
Published: Nov. 12, 2023. Version: 2.0.0
Database Credentialed Access
BOLD, a blood-gas and oximetry linked dataset
João Matos, Tristan Struja, Jack Gallifant, Luis Filipe Nakayama, Marie Charpignon, Xiaoli Liu, Jaime dos Santos Cardoso, Leo Anthony Celi, An Kwok Wong
electronic health records health equity pulse oximetry intensive care unit
Published: Nov. 8, 2023. Version: 1.0
Database Open Access
MIMIC-IV Clinical Database Demo
Alistair Johnson, Lucas Bulgarelli, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark
mimic critical care electronic health record
Published: Jan. 31, 2023. Version: 2.2
Database Credentialed Access
Tasks 1 and 3 from Progress Note Understanding Suite of Tasks: SOAP Note Tagging and Problem List Summarization
Yanjun Gao, John Caskey, Timothy Miller, Brihat Sharma, Matthew Churpek, Dmitriy Dligach, Majid Afshar
Published: Sept. 30, 2022. Version: 1.0.0
Database Credentialed Access
Learning to Ask Like a Physician: a Discharge Summary Clinical Questions (DiSCQ) Dataset
Eric Lehman
machine learning question generation question answering
Published: July 28, 2022. Version: 1.0
Model Credentialed Access
Clinical BERT Models Trained on Pseudo Re-identified MIMIC-III Notes
Eric Lehman, Sarthak Jain, Karl Pichotta, Yoav Goldberg, Byron Wallace
Published: April 28, 2021. Version: 1.0.0