Resources
Database Contributor Review
CARMEN-I: A resource of anonymized electronic health records in Spanish and Catalan for training and testing NLP tools
Eulalia Farre Maduell, Salvador Lima-Lopez, Santiago Andres Frid, Artur Conesa, Elisa Asensio, Antonio Lopez-Rueda, Helena Arino, Elena Calvo, Maria Jesús Bertran, Maria Angeles Marcos, Montserrat Nofre Maiz, Laura Tañá Velasco, Antonia Marti, Ricardo Farreres, Xavier Pastor, Xavier Borrat Frigola, Martin Krallinger
de-identification clinical ner anonymization
Published: April 20, 2024. Version: 1.0.1
Database Open Access
CheXmask Database: a large-scale dataset of anatomical segmentation masks for chest x-ray images
Nicolas Gaggion, Candelaria Mosquera, Martina Aineseder, Lucas Mansilla, Diego Milone, Enzo Ferrante
chest x-ray segmentation medical image segmentation automatic quality assesment
Published: March 1, 2024. Version: 0.4
Database Credentialed Access
INSPIRE, a publicly available research dataset for perioperative medicine
Leerang Lim, Hyung-Chul Lee
surgery perioperative medicine multi-center open dataset
Published: Dec. 28, 2023. Version: 1.2
Database Credentialed Access
CAD-Chest: Comprehensive Annotation of Diseases based on MIMIC-CXR Radiology Report
Mengliang Zhang, Xinyue Hu, Lin Gu, Tatsuya Harada, Kazuma Kobayashi, Ronald Summers, Yingying Zhu
Published: Dec. 8, 2023. Version: 1.0
Database Credentialed Access
MS-CXR-T: Learning to Exploit Temporal Structure for Biomedical Vision-Language Processing
Shruthi Bannur, Stephanie Hyland, Qianchu Liu, Fernando Pérez-García, Max Ilse, Daniel Coelho de Castro, Benedikt Boecking, Harshita Sharma, Kenza Bouzid, Anton Schwaighofer, Maria Teodora Wetscherek, Hannah Richardson, Tristan Naumann, Javier Alvarez Valle, Ozan Oktay
multimodal chest x-ray radiology cxr disease progression vision-language processing
Published: March 17, 2023. Version: 1.0.0
Database Credentialed Access
A Brazilian Multilabel Ophthalmological Dataset (BRSET)
Luis Filipe Nakayama, Mariana Goncalves, Lucas Zago Ribeiro, Helen Santos, Daniel Ferraz, Fernando Malerbi, Leo Anthony Celi, Caio Regatieri
Published: March 8, 2023. Version: 1.0.0
Database Credentialed Access
Annotation dataset of problematic opioid use and related contexts from MIMIC-III Critical Care Database discharge summaries
Melissa Poulsen, Vanessa Troiani, Philip Freda, Danielle Mowery, Anahita Davoudi
natural language processing opioid use disorder clinical notes substance use
Published: Feb. 8, 2023. Version: 1.0.0
Database Credentialed Access
Chest X-ray Dataset with Lung Segmentation
Wimukthi Indeewara, Mahela Hennayake, Kasun Rathnayake, Thanuja Ambegoda, Dulani Meedeniya
segmentation chest x-ray medical reports u-net chest radiographs mimic-cxr
Published: Feb. 8, 2023. Version: 1.0.0
Database Open Access
Gesture Recognition and Biometrics ElectroMyogram (GRABMyo)
Ning Jiang, Ashirbad Pradhan, Jiayuan He
Published: Dec. 2, 2022. Version: 1.0.2
Visualize waveformsDatabase Open Access
Wide-field calcium imaging sleep state database
Eric Landsness, Xiaohui Zhang, Wei Chen, Hanyang Miao, Michelle Tang, Lindsey Brier, Mark Anastasio, Jin-Moo Lee, Joseph Culver
sleep machine learning wide-field calcium imaging sleep state classification sleep staging
Published: March 17, 2022. Version: 1.0.1