Resources


Database Credentialed Access

Medication Extraction Labels for MIMIC-IV-Note Clinical Database

Akshay Goel, Almog Gueta, Omry Gilon, Sofia Erell, Amir Feder

Medication extraction NLP labels for 600 discharge summaries in MIMIC-IV-Note dataset.

Published: Dec. 12, 2023. Version: 1.0.0

Challenge Credentialed Access

CXR-LT: Multi-Label Long-Tailed Classification on Chest X-Rays

Gregory Holste, Song Wang, Ajay Jaiswal, Yuzhe Yang, Mingquan Lin, Yifan Peng, Atlas Wang

CXR-LT 2023 was a challenge for long-tailed, multi-label thorax disease classification on chest X-rays, held in conjunction with the ICCV 2023 workshop, CVAMD. This page contains extended long-tailed versions of the MIMIC-CXR-JPG v2.0.0 dataset.

Published: Sept. 28, 2023. Version: 1.1.0

Database Restricted Access

A multimodal dental dataset facilitating machine learning research and clinic services

wenjing liu, Yunyou Huang, Suqin Tang

A new dental dataset that contains 389 patients, three commonly used dental image models, and images of various health conditions of the oral cavity.

Published: Sept. 6, 2023. Version: 1.0.0

Database Open Access

Integration of Electroencephalogram and Eye-Gaze Datasets for Performance Evaluation in Fundamentals of Laparoscopic Surgery (FLS) Tasks

Somayeh B Shafiei, Saeed Shadpour

Brain activity and eye gaze data were collected from a group of 25 participants who completed the FLS tasks using a trainer box (Pyxus®). Each participant performed the tasks five times, and their performance was evaluated by an expert rater.

Published: Aug. 23, 2023. Version: 1.0.0

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Database Credentialed Access

RadQA: A Question Answering Dataset to Improve Comprehension of Radiology Reports

Sarvesh Soni, Kirk Roberts

RadQA is an electronic health record question answering dataset containing clinical questions that can be answered using the Findings and Impressions sections of radiology reports

electronic health records clinical notes question answering radiology reports machine reading comprehension

Published: Dec. 9, 2022. Version: 1.0.0

Database Open Access

Cerebromicrovascular Disease in Elderly with Diabetes

Vera Novak, Rodrigo Quispe

Type 2 diabetes increases risk for cerebrovascular disease, cognitive and mobility decline in older people. This project evaluated relationship between diabetes, inflammation cerebrovascular reactivity and functional outcomes.

gait and balance brain perfusion inflammation type 2 diabetes cerebromiscovascular disease cerebral vasoreactivity brain atrophy perfusion mri

Published: Aug. 5, 2022. Version: 1.0.1

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Database Credentialed Access

Learning to Ask Like a Physician: a Discharge Summary Clinical Questions (DiSCQ) Dataset

Eric Lehman

Dataset of questions asked by medical experts about patients. Medical experts will read a discharge summary line-by-line and (1) ask any question that they may have and (2) record what in the text "triggered" them to ask their question.

machine learning question generation question answering

Published: July 28, 2022. Version: 1.0

Database Credentialed Access

Critical care database comprising patients with infection at Zigong Fourth People's Hospital

Ping Xu, Lin Chen, Zhongheng Zhang

Routinely collected data from critical care units at Zigong Fourth People’s Hospital, Sichuan, China for patients admitted between January 2019 and December 2020 Missing information on temperature are updated in the new version.

Published: June 30, 2022. Version: 1.1

Database Credentialed Access

MS-CXR: Making the Most of Text Semantics to Improve Biomedical Vision-Language Processing

Benedikt Boecking, Naoto Usuyama, Shruthi Bannur, Daniel Coelho de Castro, Anton Schwaighofer, Stephanie Hyland, Maria Teodora Wetscherek, Tristan Naumann, Aditya Nori, Javier Alvarez Valle, Hoifung Poon, Ozan Oktay

MS-CXR is a new dataset containing 1162 Chest X-ray bounding box labels paired with radiology text descriptions, annotated and verified by two board-certified radiologists.

chest x-ray vision-language processing

Published: May 16, 2022. Version: 0.1

Database Open Access

The CirCor DigiScope Phonocardiogram Dataset

Jorge Oliveira, Francesco Renna, Paulo Costa, Marcelo Nogueira, Ana Cristina Oliveira, Andoni Elola, Carlos Ferreira, Alipio Jorge, Ali Bahrami Rad, Matthew Reyna, Reza Sameni, Gari Clifford, Miguel Coimbra

A large collection of multi-location heart sound signals, with 5272 records collected from 1568 subjects. Heart murmurs have been annotated by a human annotator based on their time, shape, pitch, grading, quality, location and location intensity.

signal processing murmur pitch george b moody physionet challenge 2022 murmur grading murmur location murmur timing phonocardiogram pregnant murmur shape pediatric murmur detection murmur intensity murmur quality

Published: May 10, 2022. Version: 1.0.3

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